Bioinformatics Training Resources

ONLINE COURSES:

• Coursera:  bioinformatics courses
• edX:  bioinformatics courses
• EBI’s Next Generation Sequencing Practical Course
• International Society for Computational Biology’s list of online courses in bioinformatics

IN-PERSON COURSES AND WORKSHOPS:

U-M affiliated courses and workshops:

• CSCAR Workshops
• U-M Software Carpentry
• U-M School of Public Health Fundamentals of Biostatistics (3 week summer course)
• BIOINF-527/529: Introduction to Bioinformatics & Computational Biology
• BIOINF-575: Programming Laboratory in Bioinformatics

NON-U-M AFFILIATED COURSES, WORKSHOPS, AND RESOURCES:

• Canadian Bioinformatics Workshops
• Cold Spring Harbor Laboratory Courses and Workshops
• Harvard Chan Bioinformatics Core Differential Expression analysis workshop
• Software Carpentry
• UNIX/Bash cheat-sheets
  • https://files.fosswire.com/2007/08/fwunixref.pdf
  • http://www.mathcs.emory.edu/~valerie/courses/fall10/155/resources/unix_cheatsheet.html
• StatQuest

R AND BIOCONDUCTOR TUTORIALS:

• Install R https://cran.r-project.org/
• Then install bioconductor https://www.bioconductor.org/install/
• Bioconductor course materials https://www.bioconductor.org/help/course-materials/
• Analysis workflows https://www.bioconductor.org/help/workflows/
• edX course “Introduction to Bioconductor:  Annotation and Analysis of Genomes and Genomic Assays”