Illumina BeadArray Genotyping
Using the Illumina BeadArray based assay, the DNA Sequencing Core performs high throughput custom genotyping, whole genome genotyping, copy number variation (CNV), cytogenetic analysis, and linkage analysis assays. The Core Genotyping Services for the Illumina BeadArray platform consist of the following:
- Verify DNA concentration with a PicoGreen/Qubit assay,
- Normalize sample
- Perform Illumina Genotyping assay,
- Record SNP loci intensities with an iScan Scanner,
- Create a GenomeStudio Project for DNA analysis, and
- Generate reports (i.e. genotypes, sample call rates, SNP call rates, etc).
|Primary Contact||Susan Dagenais, Ph.D.
UM DNA Sequencing Core
|Typical Cost||Click here to view internal pricing list!
Click here to view external pricing list!
|Typical Output||Typical call rates are >99% for all standard Illumina GoldenGate, Infinium, and LCG Array products.|
|How to Request||Sample Submission – Contact Susan Dagenais (email@example.com) and request a Project Quote. Please indicate the number of samples to be assayed and which Illumina BeadChip kit you would like used for the assay. We will e-mail you a Quote for the Illumina Kit costs and Estimated Core Processing fees. Once we a signed Quote, we will place an order with Ilumina, assign a Core Project Number, and you will be sent a BeadArray submission form for sample submission.|
|Sample Requirements||DNA Concentration Request – dependent upon how the stock DNA concentration was determined.
|Typical Turnaround||Typical turnaround time is 1-3 weeks.|